Media 000001840: Calcaneus
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Mammals:M-188140 Ateles fusciceps
Managed by
AMNH Mammalogy Department

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Related Media (2)

Media produced from the same original imaging that created Media 000001840 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (2)

Derived media that were created from processing Media 000001840 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download
Mesh
· Restricted Download

In Collections

Project
· Public
Team
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000001840
Media type
Volumetric Image Series
Object element or part
Calcaneus
Object represented
AMNH:Mammals:M-188140
Object taxonomy
Ateles fusciceps
Object organization
AMNH Mammal Collections
Side
Right
Orientation
--
Short description
Zipped microCT image stack
Full description
Migrated MorphoSource 1 Media File Title: Zipped microCT image stack Migrated MorphoSource 1 Media Group Title: Raw surface file Migrated MorphoSource 1 Media File Description: Zipped image stack - TIFF format Migrated MorphoSource 1 Media Group Description: raw surface
Creator
--
Date created
--
Date uploaded
November 13, 2013

FILE OBJECT DETAILS Field Definitions

File name
AMNH_188140_Ateles_fusciceps_calcR.zip
File format(s)
ZIP archive, TIFF
File size
567 MB
Image width
1086
Image height
578
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.039000
Y pixel spacing
0.039000
Z pixel spacing
0.039000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
600

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical vivaCT 75, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
AMNH Mammalogy Department
Data uploaded by
Sung-Hoon Kim
Publication status
Restricted Download
Download reviewer
AMNH Mammalogy Department
IP holder
AMNH Dept of Mammalogy
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 to DMB and ERS
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these dataoriginally appearing in Boyer et al. (2013) NSF BCS 1317525. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M1840
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-188140 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000001840: Calcaneus [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000001840: Calcaneus [CTImageSeries] [Etc] (this media)