Media 000003919: Astragalus
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
ummp:vp:38321 Omomys carteri
Managed by
Douglas Boyer

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Related Media (2)

Media produced from the same original imaging that created Media 000003919 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000003919 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000003919 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Open Download

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000003919
Media type
Mesh
Object element or part
Astragalus
Object represented
ummp:vp:38321
Object taxonomy
Omomys carteri
Object organization
Museum of Paleontology
Side
Unknown
Orientation
--
Short description
Smooth Surface Mesh
Full description
Migrated MorphoSource 1 Media File Title: Smooth Surface Mesh Migrated MorphoSource 1 Media Group Title: Zipped Tiff Stack Migrated MorphoSource 1 Media File Description: Scale bar = 4.00mm
Creator
--
Date created
--
Date uploaded
November 11, 2014

FILE OBJECT DETAILS Field Definitions

File name
UM_38321_ast_Omomys_carteri-simp-smooth.ply
File format(s)
PLY
File size
14 MB
Points
200002
Polygons
400000
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.070, 3.912, 7.108
Centroid coordinates
2.782, 4.141, 6.136
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000003917: Astragalus [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Ksenia Sokolova
Publication status
Open Download
Download reviewer
--
IP holder
Doug M. Boyer
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF BCS 1317525
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these dataoriginally appearing in Boyer and Seiffert (2013) NSF BCS 1317525. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M3919
MorphoSource DOI
 doi:10.17602/M2/M3919
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ummp:vp:38321 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000003917: Astragalus [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000003917: Astragalus [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000003917: Astragalus [CTImageSeries] [Etc] was processed to create derived Media 000003919: Astragalus [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000003919: Astragalus [Mesh] [Etc] (this media)