Media 000009792: Mandibular Second Molar
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000009792: Mandibular Second Molar
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
Media Display
In Collections
TAGS
GENERAL DETAILS Field Definitions
Media ID
000009792
Media type
Mesh
Object element or part
mandibular second molar
Object represented
Object taxonomy
Elphidotarsius cf. florencae
Object organization
Side
--
Orientation
--
Short description
mesh file used in Prufrock et al. (2016) AJPA
Full description
Migrated MorphoSource 1 Media File Title: mesh file used in Prufrock et al. (2016) AJPA Migrated MorphoSource 1 Media Group Title: mesh file(s) Migrated MorphoSource 1 Media File Description: cropped raw mesh
Creator
--
Date created
--
Date uploaded
March 03, 2016
FILE OBJECT DETAILS Field Definitions
File name
YPM-PU-14282_M8059-9577.ply
File format(s)
PLY
File size
10.7 MB
Points
154546
Polygons
308163
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
1.545, 1.131, 1.742
Centroid coordinates
3.146, 4.053, 1.222
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(4 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Mary Silcox, Doug Boyer, Kristen Prufrock
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSERC Discovery Grant (to M.T.S.); Grant number: NSF BCS 1304045 (to D.M.B. and E.M.S.); NSF DDIG BCS-0622544 (to D.M.B.); Grant sponsor: Leakey Foundation Grant (to D.M.B. and E.M.S.); American Society of Mammalogists Grant Evolving Earth Foundation (to D.M.B.)
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these data. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
ypm:vp:ypm vppu 014282
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
doug boyer
Event date
August 19, 2013
Software
CT Scan Pro
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
Geometry
Shading correction
No
Frame averaging
1
Projections
3142
Voltage
150
Power
--
Amperage
149
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
Area (single or tiled detector)
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
No
Optical magnification
No
Acquisition type
Sequenced
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 1 activity
to create
derived
Media 000386283: Dentary [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
doug boyer
Event date
August 19, 2013
Software
CT agent
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
CT agent
Description
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000386283: Dentary [CTImageSeries] [CT]
was processed
with 3 activities
to create
derived
Media 000009792: Mandibular Second Molar [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Kristen Prufrock, Jimmy Thostenson, Mary Silcox, Doug Boyer, Miles Schaeffer
Event date
--
Software
CT agent
Description
--
Description attachment
None
Processing Activity 1: Reconstructed Tomography to Mesh
Software
Avizo
Description
Processing Activity 2: Crop
Software
Avizo
Description
Processing Activity 3: Transform: Reflection
Software
Avizo
Description
Media produced by this event on MorphoSource
Media 000009792: Mandibular Second Molar [Mesh] [CT] (this media)