Media 000038964: Proximal Phalanx (Manual)
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UMMP:VP:87990 Plesiadapis cookei
Managed by
Douglas Boyer

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Related Media (2)

Media produced from the same original imaging that created Media 000038964 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000038964 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Child Media (1)

Derived media that were created from processing Media 000038964 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000038964
Media type
Mesh
Object element or part
Proximal phalanx (manual)
Object represented
UMMP:VP:87990
Object taxonomy
Plesiadapis cookei
Object organization
Museum of Paleontology
Side
Unknown
Orientation
--
Short description
Raw surface file
Full description
Migrated MorphoSource 1 Media File Title: Raw surface file Migrated MorphoSource 1 Media Group Title: MicroCT Volume & Derivative Mesh Files Migrated MorphoSource 1 Media Group Description: This bone is depicted in Boyer & Gingerich (2018) Figure 52B
Creator
--
Date created
--
Date uploaded
December 22, 2017

FILE OBJECT DETAILS Field Definitions

File name
UM87990_Plesiadapis_L_proximal_phalanx2_cc_raw.ply
File format(s)
PLY
File size
30.2 MB
Points
421201
Polygons
842354
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.513, 4.173, 15.331
Centroid coordinates
24.985, 11.736, 12.421
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000038963: Proximal Phalanx (Manual) [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Gabriel Yapuncich
Publication status
Restricted Download
Download reviewer
--
IP holder
University of Michigan Museum of Paleontology
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF BCS 1440742 (to DM Boyer and GF Gunnell), BCS 1440588 (to JI Bloch), and BCS 1552848 (to DM Boyer)
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these data , the collection of which was funded by NSF BCS 1440742, BCS 1440588, BCS 1552848. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M38964
MorphoSource DOI
 doi:10.17602/M2/M38964
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMP:VP:87990 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
110
Power
--
Amperage
133
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000038963: Proximal Phalanx (Manual) [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000038963: Proximal Phalanx (Manual) [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000038963: Proximal Phalanx (Manual) [CTImageSeries] [Etc] was processed to create derived Media 000038964: Proximal Phalanx (Manual) [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000038964: Proximal Phalanx (Manual) [Mesh] [Etc] (this media)