Media 000071914: Whole Body
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000071914: Whole Body
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Team
· Public
Project
· Public
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000071914
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Zootoca vivipara
Object organization
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
March 15, 2019
FILE OBJECT DETAILS Field Definitions
File name
CAS-herps-215229_Zootoca-vivipara.zip
File format(s)
ZIP archive, TIFF
File size
391 MB
Image width
261
Image height
441
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.053132
Y pixel spacing
0.053132
Z pixel spacing
0.053132
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,000
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, University of Michigan Museum of Zoology, Research Museums Center (University of Michigan)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
California Academy of Sciences
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701870; NSF DBI-1701713; oVert TCN; NSF DBI-1701714
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: California Academy of Sciences provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
CAS:HERP:215229
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
University of Michigan Museum of Zoology, Research Museums Center (University of Michigan)
Creator
Ramon Nagesan, Gregory Pandelis, Coen Long
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
250
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
1601
Voltage
85
Power
0.017
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000071914: Whole Body [CTImageSeries] [Etc] (this media).
Processing Details Field Definitions
Creator
Ramon Nagesan, Gregory Pandelis, Coen Long
Event date
--
Software
--
Description
--
Description attachment
None