Media 000072565: Head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
YPM:VZ:YPM HERR 019736.001 Sternotherus odoratus
Managed by
Nelson Rios

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Related Media (1)

Media produced from the same original imaging that created Media 000072565 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (1)

Derived media that were created from processing Media 000072565 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000072565
Media type
Volumetric Image Series
Object element or part
head
Object represented
YPM:VZ:YPM HERR 019736.001
Object taxonomy
Sternotherus odoratus
Object organization
Vertebrate Zoology Division - Herpetology, Yale Peabody Museum
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
March 25, 2019

FILE OBJECT DETAILS Field Definitions

File name
YPM_VZ_YPM-HERR-019736_Head.zip
File format(s)
ZIP archive, TIFF
File size
3.66 GB
Image width
1200
Image height
1027
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.051456
Y pixel spacing
0.051456
Z pixel spacing
0.051456
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,863

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Nelson Rios
Data uploaded by
Edward Stanley
Publication status
Restricted Download
Download reviewer
Greg Watkins-Colwell
IP holder
Yale University
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN; NSF DBI-1701769; NSF DBI-1701714
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Peabody Museum, Yale University provided access to these data provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M72565
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VZ:YPM HERR 019736.001 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1440
Voltage
100
Power
0.02
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000072565: Head [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000072565: Head [CTImageSeries] [Etc] (this media)