Media 000075155: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
CAS:HERP:263581 Cordylus sp.
Managed by
Lauren Scheinberg

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Related Media (2)

Media produced from the same original imaging that created Media 000075155 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (2)

Derived media that were created from processing Media 000075155 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Open Download

In Collections

Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000075155
Media type
Volumetric Image Series
Object element or part
Whole body
Object represented
CAS:HERP:263581
Object taxonomy
Cordylus sp.
Object organization
CAS Herpetology (HERP)
Side
--
Orientation
--
Short description
Tomogram Stack
Full description
Migrated MorphoSource 1 Media File Title: Tomogram Stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
April 14, 2019

FILE OBJECT DETAILS Field Definitions

File name
CAS-H-263581-body.zip
File format(s)
ZIP archive, TIFF
File size
1.95 GB
Image width
665
Image height
596
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.045575
Y pixel spacing
0.045575
Z pixel spacing
0.045575
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
3,128

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Lauren Scheinberg
Data uploaded by
Edward Stanley
Publication status
Open Download
Download reviewer
Lauren Scheinberg
IP holder
California Academy of Sciences
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF-DEB #1556559
Publisher
--
Cite as
originally appearing in , the collection of which was funded by
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M75155
MorphoSource DOI
 doi:10.17602/M2/M75155
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CAS:HERP:263581 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.333096
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1000
Voltage
80
Power
0.014
Amperage
175
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000075155: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000075155: Whole Body [CTImageSeries] [CT] (this media)