Media 000093583: Whole Specimen
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
CM:Birds:A3142 Harpia harpyja
Managed by
Serina Brady

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Media produced from the same original imaging that created Media 000093583 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

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Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000093583
Media type
Volumetric Image Series
Object element or part
Whole specimen
Object represented
CM:Birds:A3142
Object taxonomy
Harpia harpyja
Object organization
CM Birds Collection
Side
--
Orientation
--
Short description
CM A3142 Harpia harpyja
Full description
Migrated MorphoSource 1 Media File Title: CM A3142 Harpia harpyja Migrated MorphoSource 1 Media Group Title: CT volume and derivatives
Creator
--
Date created
--
Date uploaded
October 31, 2019

FILE OBJECT DETAILS Field Definitions

File name
Harpia_harpyja_CM_A3142_TiffStack.zip
File format(s)
ZIP archive, TIFF
File size
322 MB
Image width
509
Image height
479
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.837891
Y pixel spacing
0.837891
Z pixel spacing
0.600037
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,388

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Siemens 128 slice CT, Texas Institute for Preclinical Studies (Texas A&M University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Serina Brady
Data uploaded by
Heather Prestridge
Publication status
Restricted Download
Download reviewer
Serina Brady
IP holder
Carnegie Museum of Natural History, Section of Birds
Copyright statement
--
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI 1702442; NSF DBI-1701714; oVert TCN
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Carnegie Museum of Natural History provided access to these datathe collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M93583
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CM:Birds:A3142 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Texas Institute for Preclinical Studies (Texas A&M University)
Creator
Vidya Sridhar
Event date
April 07, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
500
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
140
Power
--
Amperage
250
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000093583: Whole Specimen [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Vidya Sridhar
Event date
April 07, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000093583: Whole Specimen [CTImageSeries] [CT] (this media)