Media 000101192: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UF:Herp:71527 Pseudis paradoxa
Managed by
David Blackburn

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Related Media (2)

Media produced from the same original imaging that created Media 000101192 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (2)

Derived media that were created from processing Media 000101192 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Open Download
Mesh
· Restricted Download

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000101192
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
UF:Herp:71527
Object taxonomy
Pseudis paradoxa
Object organization
FLMNH Division of Herpetology
Side
--
Orientation
--
Short description
Tomogram stack (16 bit Tiffs)
Full description
Migrated MorphoSource 1 Media File Title: Tomogram stack (16 bit Tiffs) Migrated MorphoSource 1 Media Group Title: MicroCT volume and derivatives of uf:herp:71527, Pseudis paradoxa
Creator
--
Date created
--
Date uploaded
February 19, 2020

FILE OBJECT DETAILS Field Definitions

File name
Pseudis-paradoxa_UF71527.zip
File format(s)
ZIP archive, TIFF
File size
2.05 GB
Image width
1260
Image height
661
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.044507
Y pixel spacing
0.044507
Z pixel spacing
0.044507
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,019

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
David Blackburn
Data uploaded by
Edward Stanley
Publication status
Restricted Download
Download reviewer
--
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714; oVert TCN
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
Agreement File

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M101192
MorphoSource DOI
 doi:10.17602/M2/M101192
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:71527 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1700
Voltage
50
Power
0.01
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000101192: Whole Body [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000101192: Whole Body [CTImageSeries] [Etc] (this media)