Media 000105844: Contrast Stained: Iodine Potassium Iodide (3.75% I2 Ki) / Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000105844: Contrast Stained: Iodine Potassium Iodide (3.75% I2 Ki) / Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
Project
· Public
Team
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000105844
Media type
Volumetric Image Series
Object element or part
contrast stained: Iodine potassium iodide (3.75% I2KI) / whole body
Object represented
Object taxonomy
Limnothlypis swainsonii
Object organization
Side
--
Orientation
--
Short description
zipped 16 bit tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped 16 bit tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives Migrated MorphoSource 1 Media Group Description: Al calibration
Creator
--
Date created
--
Date uploaded
March 06, 2020
FILE OBJECT DETAILS Field Definitions
File name
CM-A3824_Limnothlypis_swainsonii_diceCT_week2_Rec.zip
File format(s)
ZIP archive, TIFF
File size
8 GB
Image width
1132
Image height
1180
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.030986
Y pixel spacing
0.030986
Z pixel spacing
0.030986
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
3,858
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Museum of Comparative Zoology Scanning Facility (Harvard University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Carnegie Museum of Natural History, Section of Birds
Copyright statement
--
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714; NSF DBI-1702263; overt TCN
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
CM:Birds:A3824
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Museum of Comparative Zoology Scanning Facility (Harvard University)
Creator
Matt Gage
Event date
April 07, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
1.085
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
1043
Voltage
80
Power
0.008
Amperage
100
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000105844: Contrast Stained: Iodine Potassium Iodide (3.75% I2 Ki) / Whole Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Matt Gage
Event date
April 07, 2021
Software
--
Description
--
Description attachment
None