Media 000109826: Trunk
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
YPM:VZ:YPM ORN 124258 Aegotheles cristatus cristatus
Managed by
Nelson Rios

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Related Media (10)

Media produced from the same original imaging that created Media 000109826 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000109826 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (9)

Other media associated with the original imaging that produced Media 000109826 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download
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GENERAL DETAILS Field Definitions

Media ID
000109826
Media type
Mesh
Object element or part
trunk
Object represented
YPM:VZ:YPM ORN 124258
Object taxonomy
Aegotheles cristatus cristatus
Object organization
Vertebrate Zoology Division - Ornithology, Yale Peabody Museum
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
--
Date created
--
Date uploaded
March 13, 2020

FILE OBJECT DETAILS Field Definitions

File name
Aegotheles_cristatus_YPM_124258_Trunk.ply
File format(s)
PLY
File size
285 MB
Points
3704000
Polygons
7402420
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
27.494, 24.213, 49.127
Centroid coordinates
16.362, 22.450, 52.080
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000109823: Element Unspecified [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Nelson Rios
Data uploaded by
Roger Benson
Publication status
Restricted Download
Download reviewer
Greg Watkins-Colwell
IP holder
Yale University
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Roger Benson provided access to these dataoriginally appearing in … , the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M109826
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VZ:YPM ORN 124258 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)
Creator
Roger Benson
Event date
May 12, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.177
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2201
Voltage
75
Power
--
Amperage
393
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000109823: Element Unspecified [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Roger Benson
Event date
May 12, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000109823: Element Unspecified [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000109823: Element Unspecified [CTImageSeries] [CT] was processed to create derived Media 000109826: Trunk [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Roger Benson
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000109826: Trunk [Mesh] [Etc] (this media)