Media 000113682: Thoracic Vertebrae
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
FMNH:Mammals:160178 Scutisorex somereni
Managed by
Sharon Grant

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Related Media (1)

Media produced from the same original imaging that created Media 000113682 (this media). Includes all media associated with this media through an imaging and processing workflow.

Other Related Media (1)

Other media associated with the original imaging that produced Media 000113682 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

CTImageSeries
· Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000113682
Media type
Volumetric Image Series
Object element or part
thoracic vertebrae
Object represented
FMNH:Mammals:160178
Object taxonomy
Scutisorex somereni
Object organization
Field Museum of Natural History (Zoology) Mammal Collection
Side
Midline
Orientation
--
Short description
Otsu segmented thoracic vertebral ROIs
Full description
Migrated MorphoSource 1 Media File Title: Otsu segmented thoracic vertebral ROIs Migrated MorphoSource 1 Media Group Title: Vertebral ROIs for all thoracic vertebrae of FMNH 160178
Creator
--
Date created
--
Date uploaded
March 25, 2020

FILE OBJECT DETAILS Field Definitions

File name
FMNH_160178_Scutisorex_somereni_ant_otsu.zip
File format(s)
ZIP archive, TIFF
File size
402 KB
Image width
32
Image height
32
Color space
BlackIsZero
Color depth
8
Compression
--
X pixel spacing
22.665000
Y pixel spacing
22.665000
Z pixel spacing
22.665000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
709

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Sharon Grant
Data uploaded by
Stephanie Smith
Publication status
Restricted Download
Download reviewer
Janeen Jones; Kate Webbink; Adam Ferguson; Stephanie Smith
IP holder
--
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1811627
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: SM Smith and KD Angielczyk provided access to these data with data collection funded by NSF DBI-1811627. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://www.fieldmuseum.org/science/research/use-collections-data-and-images

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M113682
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:Mammals:160178 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UChicago PaleoCT (University of Chicago)
Creator
SM Smith
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.2
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
750
Voltage
70
Power
--
Amperage
290
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000113682: Thoracic Vertebrae [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
SM Smith
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000113682: Thoracic Vertebrae [CTImageSeries] [Etc] (this media)