Media 000113848: Skull
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
MVZ:Mamm:MVZ:Mamm:184054 Speothos venaticus
Managed by
Carol Spencer

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Related Media (0)

Media produced from the same original imaging that created Media 000113848 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000113848
Media type
Volumetric Image Series
Object element or part
skull
Object represented
MVZ:Mamm:MVZ:Mamm:184054
Object taxonomy
Speothos venaticus
Object organization
Museum of Vertebrate Zoology (MVZ) Mammal Collection (Arctos)
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 0383\\r\\n\\r\\nTheodor: \\r\\nSpeothoM: Scans of entire skull and close-up of turbinates of Speothos venaticus (male, MVZ 184054 (orig. 1268 M. H.), Tarpon Zoo, Tarpon Springs, Florida, 29 September 1970, M. Hildebrand), for Jessica Theodor and Blaire Van Valkenburgh of the Department of Organismic Biology, Ecology and Evolution, UCLA, in collaboration with Timothy Rowe of the University of Texas Department of Geological Sciences. Warp corrected scans of turbinates archived on a later disc.\\r\\n\\r\\nskull/16bit: Scans of entire skull. Scanned by Matthew Colbert on 24 April 2001. II, 150 kV, 0.16 mA, no filter, empty mount wedge, 160% offset, slice thickness 3 lines (= 0.310 mm), S.O.D. 180 mm, 1200 views, 2 samples per view, interslice spacing 3 lines (= 0.310 mm), field of reconstruction 90 mm (maximum field of view = 91.354 mm), reconstruction offset 610, reconstruction scale 91. Scanned in three-slice mode. \\r\\n\\r\\nskull/warpcorr: The above images modified with IDL software “Unwarp v.1.0” written by Dr. Richard Ketcham to correct for radial distortion of images introduced by ACTIS scanning software. Corrected images are now 522 pixels by 522 pixels, resulting in a revised field of reconstruction of 91.758 mm.\\r\\n\\n\\nRelated URL: http://www.digimorph.org/specimens/Speothos_venaticus/ Migrated MorphoSource 1 Media Group Description: Related URL: http://www.digimorph.org/specimens/Speothos_venaticus/
Creator
--
Date created
--
Date uploaded
March 28, 2020

FILE OBJECT DETAILS Field Definitions

File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
101 MB
Image width
500
Image height
471
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.176000
Y pixel spacing
0.176000
Z pixel spacing
0.310000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
453

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Carol Spencer
Data uploaded by
Barbara Sulbaran
Publication status
Restricted Download
Download reviewer
Carla Cicero; Carol Spencer; Jessie Maisano; Museum of Vertebrate Zoology; Chris Conroy
IP holder
Museum of Vertebrate Zoology, UC Berkeley
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
IIS-9874781, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Blaire Van Valkenburgh and Tim Rowe provided access to these data , with data collection funded by NSF IIS-9874781 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://mvz.berkeley.edu/mvzdata_terms/

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M113848
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object MVZ:Mamm:MVZ:Mamm:184054 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
1200
Voltage
150
Power
--
Amperage
160
Surrounding material
empty mount
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000113848: Skull [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000113848: Skull [CTImageSeries] [Etc] (this media)