Media 000114249: Turbinates
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UCLA:Mammals:15180 Vulpes vulpes
Managed by
Jessie Maisano

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Media produced from the same original imaging that created Media 000114249 (this media). Includes all media associated with this media through an imaging and processing workflow.

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000114249
Media type
Volumetric Image Series
Object element or part
turbinates
Object represented
UCLA:Mammals:15180
Object taxonomy
Vulpes vulpes
Object organization
UCLA Donald R. Dickey Bird and Mammal Collection
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 0353\\r\\n\\r\\nTheodor:\\r\\n The images below were modified with IDL software “Unwarp v.1.0” written by Dr. Richard Ketcham to correct for radial distortion of images introduced by ACTIS scanning software. \\r\\n\\r\\nVulpesF: Corrected scans of turbinates of Vulpes alascensis alascensis, (female, UCLA 15180, location Barrow, Alaska), for Jessica Theodor and Blaire Van Valkenburgh of the Department of Organismic Biology, Ecology and Evolution, UCLA, in collaboration with Timothy Rowe of the University of Texas Department of Geological Sciences. \\r\\n\\r\\nOriginal scan parameters for turbinates: Scanned by Matthew Colbert on 12 October 2000. 1024x1024 16-bit TIFF images. II, 120 kV, 0.2 mA, no filter, empty mount wedge, 160% offset, slice thickness 5 lines (= 0.279 mm), S.O.D. 96 mm, 1200 views, 6 samples per view, inter-slice spacing 5 lines (= 0.279 mm), field of reconstruction 31 mm (maximum field of view 48.6 mm), reconstruction offset 540, reconstruction scale 55. Scanned in three-slice mode.\\r\\n\\r\\nturb/warpcorr: corrected 16bit images. Images are now 1032 X 1032 pixels, resulting in a revised field of reconstruction of 31.242 mm.\\r\\n\\n\\nRelated URL: http://www.digimorph.org/specimens/Vulpes_vulpes/female/ Migrated MorphoSource 1 Media Group Description: Related URL: http://www.digimorph.org/specimens/Vulpes_vulpes/female/
Creator
--
Date created
--
Date uploaded
April 07, 2020

FILE OBJECT DETAILS Field Definitions

File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
114 MB
Image width
1034
Image height
1034
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.030000
Y pixel spacing
0.030000
Z pixel spacing
0.279000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
102

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jessie Maisano
Data uploaded by
Jessie Maisano
Publication status
Restricted Download
Download reviewer
Jessie Maisano
IP holder
University of California Los Angeles
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
IIS-9874781, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Blaire Van Valkenburgh provided access to these data , with data collection funded by NSF IIS-9874781 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M114249
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCLA:Mammals:15180 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
6
Projections
1200
Voltage
120
Power
--
Amperage
200
Surrounding material
empty mount
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000114249: Turbinates [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000114249: Turbinates [CTImageSeries] [Etc] (this media)