Media 000115986: Wholebody
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000115986
Media type
Volumetric Image Series
Object element or part
Wholebody
Object represented
Object taxonomy
Hypopachus barberi
Side
Midline
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media File Description: Tiff stack, cropped and rotated in FIJI/ImageJ
Creator
--
Date created
--
Date uploaded
May 11, 2020

FILE OBJECT DETAILS Field Definitions

File name
UF-166707_wholebody_20February2019_H_sp_cb_000_crop_rotate_0000.zip
File format(s)
ZIP archive, TIFF
File size
396 MB
Image width
804
Image height
448
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.042 mm
Y pixel spacing
0.042 mm
Z pixel spacing
0.042 mm
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
976

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Shimadzu SMX-100CT, Shimadzu Center for Environmental Forensics and Material Science (University of Texas at Arlington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
--
IP holder
Justin Jacobs
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:166707 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Shimadzu Center for Environmental Forensics and Material Science (University of Texas at Arlington)
Creator
Justin Jacobs
Event date
June 08, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
960 sec
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
4
Projections
6
Voltage
65 kV
Power
0.02
Amperage
40 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000115986: Wholebody [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Justin Jacobs
Event date
June 08, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000115986: Wholebody [CTImageSeries] [CT] (this media)