Media 000116279: Brain Endocast
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
CM:Birds:S15896 Apus apus
Managed by
Serina Brady

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Related Media (2)

Media produced from the same original imaging that created Media 000116279 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000116279 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000116279 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Restricted Download

In Collections

Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000116279
Media type
Mesh
Object element or part
brain endocast
Object represented
CM:Birds:S15896
Object taxonomy
Apus apus
Object organization
CM Birds Collection
Side
NotApplicable
Orientation
--
Short description
Brain endocast STL
Full description
Migrated MorphoSource 1 Media File Title: Brain endocast STL Migrated MorphoSource 1 Media Group Title: STL
Creator
--
Date created
--
Date uploaded
May 20, 2020

FILE OBJECT DETAILS Field Definitions

File name
Apus-apus-CM-Birds-S15896-endocast.stl
File format(s)
STL
File size
28.6 MB
Points
300000
Polygons
599969
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
13.739, 11.644, 12.603
Centroid coordinates
1.253, 264.864, 0.572
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000109633: Skull [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric eXplore CT 120 in vivo, Ohio University MicroCT Facility (Ohio University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Serina Brady
Data uploaded by
Catherine Early
Publication status
Restricted Download
Download reviewer
Serina Brady
IP holder
Carnegie Museum of Natural History, Section of Birds
Copyright statement
--
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF grants to L. M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503); NSF Graduate Research Fellowship to C. M. Early (DGE-1060934, DGE-1645419); American Museum of Natural History Chapman Ornithology Grant to C. M. Early
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: C. M. Early, A. N. Iwaniuk, R. C. Ridgely, and L. M. Witmer provided access to these dataoriginally appearing in Early et al., 2020, the generation of which was funded by an NSF Graduate Research Fellowship to Catherine M. Early (DGE-1060934, DGE-1645419), American Museum of Natural History Chapman Ornithology Grant to Catherine M. Early, and NSF grants to Lawrence M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503). The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M116279
MorphoSource DOI
 doi:10.17602/M2/M116279
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CM:Birds:S15896 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Ohio University MicroCT Facility (Ohio University)
Creator
Ryan Ridgely
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
63000
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
1800
Voltage
120
Power
--
Amperage
32000
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000109633: Skull [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Ryan Ridgely
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000109633: Skull [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000109633: Skull [CTImageSeries] [Etc] was processed to create derived Media 000116279: Brain Endocast [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Ryan Ridgely
Event date
February 23, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116279: Brain Endocast [Mesh] [CT] (this media)