Media 000116288: Brain Endocast
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
amnh:birds:SKEL-2310 Colinus virginianus
Managed by
Thomas Trombone

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Related Media (1)

Media produced from the same original imaging that created Media 000116288 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000116288 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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GENERAL DETAILS Field Definitions

Media ID
000116288
Media type
Mesh
Object element or part
brain endocast
Object represented
amnh:birds:SKEL-2310
Object taxonomy
Colinus virginianus
Object organization
AMNH Ornithology Collection
Side
NotApplicable
Orientation
--
Short description
Brain endocast STL
Full description
Migrated MorphoSource 1 Media File Title: Brain endocast STL Migrated MorphoSource 1 Media Group Title: STL
Creator
--
Date created
--
Date uploaded
May 20, 2020

FILE OBJECT DETAILS Field Definitions

File name
AMNH_Birds_SKEL2310_Colinus-virginianus.stl
File format(s)
STL
File size
114 MB
Points
297866
Polygons
595717
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
15.487, 13.694, 15.958
Centroid coordinates
11.385, 11.823, 8.450
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000116118: Skull [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x, AMNH Microscopy and Imaging Facility (MIF) (American Museum of Natural History)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Thomas Trombone
Data uploaded by
Catherine Early
Publication status
Restricted Download
Download reviewer
Thomas Trombone
IP holder
Catherine M. Early
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF grants to L. M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503); American Museum of Natural History Chapman Ornithology Grant to C. M. Early; NSF Graduate Research Fellowship to C. M. Early (DGE-1060934, DGE-1645419)
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: C. M. Early, A. N. Iwaniuk, R. C. Ridgely, and L. M. Witmer provided access to these dataoriginally appearing in Early et al., 2020, the generation of which was funded by an NSF Graduate Research Fellowship to Catherine M. Early (DGE-1060934, DGE-1645419), American Museum of Natural History Chapman Ornithology Grant to Catherine M. Early, and NSF grants to Lawrence M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503). The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M116288
MorphoSource DOI
 doi:10.17602/M2/M116288
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object amnh:birds:SKEL-2310 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
AMNH Microscopy and Imaging Facility (MIF) (American Museum of Natural History)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
130
Power
--
Amperage
150
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000116118: Skull [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116118: Skull [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000116118: Skull [CTImageSeries] [Etc] was processed to create derived Media 000116288: Brain Endocast [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
February 23, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116288: Brain Endocast [Mesh] [CT] (this media)