Media 000125765: Carpometacarpus
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
nhmuk:A/2007.4.1 Calcarius lapponicus
Managed by
Roger Benson

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Related Media (11)

Media produced from the same original imaging that created Media 000125765 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000125765 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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Other Related Media (10)

Other media associated with the original imaging that produced Media 000125765 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Image
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Mesh
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Mesh
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Mesh
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Mesh
· Open Download
Mesh
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Mesh
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Mesh
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In Collections

Project
· Public
Project
· Public

TAGS

GENERAL DETAILS Field Definitions

Media ID
000125765
Media type
Mesh
Object element or part
carpometacarpus
Object represented
nhmuk:A/2007.4.1
Object taxonomy
Calcarius lapponicus
Object organization
Natural History Museum (London) Collection Specimens
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
--
Date created
--
Date uploaded
July 14, 2020

FILE OBJECT DETAILS Field Definitions

File name
Calcarius_lapponicus_NHMUK_A2007.4.1_Carpometacarpus_right.ply
File format(s)
PLY
File size
16.8 MB
Points
239245
Polygons
477874
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
9.347, 7.685, 11.055
Centroid coordinates
24.155, 31.129, 84.413
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000125759: Whole Animal [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Roger Benson
Data uploaded by
Roger Benson
Publication status
Open Download
Download reviewer
--
IP holder
Natural History Museum, London
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
Lizzy Steell
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Roger Benson provided access to these dataoriginally appearing in Steell, E.M., Nguyen, J.M.T., Benson, R.B.J. & Field, D.J (2022) Comparative anatomy of the passerine carpometacarpus helps illuminate the early fossil record of crown Passeriformes. Journal of Anatomy, 00, 1–15. Available from: https://doi.org/10.1111/joa.13761 , the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M125765
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object nhmuk:A/2007.4.1 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)
Creator
Roger Benson, Tom Davies
Event date
April 13, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.354
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1601
Voltage
95
Power
--
Amperage
274
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000125759: Whole Animal [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Roger Benson, Tom Davies
Event date
April 13, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000125759: Whole Animal [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000125759: Whole Animal [CTImageSeries] [CT] was processed to create derived Media 000125765: Carpometacarpus [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Roger Benson, Tom Davies
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000125765: Carpometacarpus [Mesh] [CT] (this media)