Media 000158534: 3rd Cervical Vertebra
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
USNM:BIRDS:USNM 19694 Ephippiorhynchus asiaticus
Managed by
Chris Milensky

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Related Media (7)

Media produced from the same original imaging that created Media 000158534 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000158534 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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Other Related Media (6)

Other media associated with the original imaging that produced Media 000158534 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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Mesh
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Mesh
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Mesh
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Mesh
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Mesh
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GENERAL DETAILS Field Definitions

Media ID
000158534
Media type
Mesh
Object element or part
3rd cervical vertebra
Object represented
USNM:BIRDS:USNM 19694
Object taxonomy
Ephippiorhynchus asiaticus
Object organization
NMNH - Division of Birds
Side
Midline
Orientation
--
Short description
Ephippiorhynchus asiaticus C3 mesh
Full description
Migrated MorphoSource 1 Media File Title: Ephippiorhynchus asiaticus C3 mesh Migrated MorphoSource 1 Media Group Title: HRXCT scan
Creator
--
Date created
--
Date uploaded
August 19, 2020

FILE OBJECT DETAILS Field Definitions

File name
E_asiaticus_19694_C3.ply
File format(s)
PLY
File size
11.4 MB
Points
87637
Polygons
175322
Map type
--
UV coordinates
False
Vertex color
True
Bounding box dimensions
21.114, 26.414, 22.164
Centroid coordinates
11.763, 10.768, 10.263
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000116257: Pre Synsacral Vertebrae [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
North Star Imaging NSI Custom build, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Chris Milensky
Data uploaded by
Andrew Moore
Publication status
Restricted Download
Download reviewer
Chris Milensky
IP holder
Smithsonian Institution, National Museum of Natural History
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DGE-1246908, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Andrew Moore provided access to these data , with data collection funded by NSF DGE-1246908 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M158534
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:BIRDS:USNM 19694 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.5
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
none
Projections
3000
Voltage
180
Power
--
Amperage
220
Surrounding material
0.25 pF gain
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000116257: Pre Synsacral Vertebrae [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116257: Pre Synsacral Vertebrae [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000116257: Pre Synsacral Vertebrae [CTImageSeries] [Etc] was processed to create derived Media 000158534: 3rd Cervical Vertebra [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000158534: 3rd Cervical Vertebra [Mesh] [Etc] (this media)