Media 000164503: Whole Body
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
NCSM:Herp:79411 Sylvirana nigrovittata
Managed by
David Blackburn

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Related Media (2)

Media produced from the same original imaging that created Media 000164503 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000164503 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000164503 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000164503
Media type
Mesh
Object element or part
whole body
Object represented
NCSM:Herp:79411
Object taxonomy
Sylvirana nigrovittata
Object organization
NCSM Herpetology Collection
Side
--
Orientation
--
Short description
Skeleton mesh
Full description
Migrated MorphoSource 1 Media File Title: Skeleton mesh Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
October 08, 2020

FILE OBJECT DETAILS Field Definitions

File name
Sylvirana-nigrovittata-ncsm_herp_79411_skel.stl
File format(s)
STL
File size
133 MB
Points
1384558
Polygons
2779493
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
41.856, 14.125, 48.037
Centroid coordinates
0.605, 0.309, 1.380
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000059680: Whole Body [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
David Blackburn
Data uploaded by
Karina Riddell
Publication status
Restricted Download
Download reviewer
David Blackburn
IP holder
Florida Museum of Natural History
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714; oVert TCN
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: North Carolina Museum of Natural Sciences provided access to these data provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M164503
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object NCSM:Herp:79411 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.200098
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1560
Voltage
100
Power
0.02
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000059680: Whole Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000059680: Whole Body [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000059680: Whole Body [CTImageSeries] [Etc] was processed to create derived Media 000164503: Whole Body [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000164503: Whole Body [Mesh] [Etc] (this media)