Media 000167878: Dicect
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
CAS:HERP:196527 Breviceps poweri
Managed by
Lauren Scheinberg

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Related Media (0)

Media produced from the same original imaging that created Media 000167878 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

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Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000167878
Media type
Volumetric Image Series
Object element or part
dicect
Object represented
CAS:HERP:196527
Object taxonomy
Breviceps poweri
Object organization
CAS Herpetology (HERP)
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
December 07, 2020

FILE OBJECT DETAILS Field Definitions

File name
CAS-H-196527-DICECT.zip
File format(s)
ZIP archive, TIFF
File size
949 MB
Image width
1159
Image height
827
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.037920
Y pixel spacing
0.037920
Z pixel spacing
0.037920
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,997

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Lauren Scheinberg
Data uploaded by
Edward Stanley
Publication status
Open Download
Download reviewer
Lauren Scheinberg
IP holder
California Academy of Sciences
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701870; oVert TCN; NSF DBI-1701714
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: California Academy of Sciences provided access to these data provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M167878
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CAS:HERP:196527 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
2100
Voltage
120
Power
0.024
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000167878: Dicect [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000167878: Dicect [CTImageSeries] [CT] (this media)