Media 000170173: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000170173: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000170173
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Baeolophus bicolor
Object organization
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
December 22, 2020
FILE OBJECT DETAILS Field Definitions
File name
UF_Bird_52651.zip
File format(s)
ZIP archive, TIFF
File size
818 MB
Image width
437
Image height
583
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.078868
Y pixel spacing
0.078868
Z pixel spacing
0.078868
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,975
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
--
IP holder
University of Florida
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
oVert TCN; NSF DBI-1701714
Publisher
--
Cite as
Blackburn, D.C., et al. 2024. Increasing the impact of vertebrate scientific collections through 3D-imaging: the openVertebrate (oVert) Thematic Collections Network. BioScience 74: 169–186. https://doi.org/10.1093/biosci/biad120; Migrated MorphoSource 1 Media Citation Instructions: University of Florida provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UF:Birds:52651
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
0.200098
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
960
Voltage
90
Power
0.0198
Amperage
220
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000170173: Whole Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None