Media 000357578: Seeds In Crop
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UMMZ:birds:68739 Ectopistes migratorius
Managed by
Han Hu

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Related Media (4)

Media produced from the same original imaging that created Media 000357578 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000357578 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

Other Related Media (3)

Other media associated with the original imaging that produced Media 000357578 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Open Download
Mesh
· Open Download
Image
· Open Download

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000357578
Media type
Mesh
Object element or part
seeds in crop
Object represented
UMMZ:birds:68739
Object taxonomy
Ectopistes migratorius
Object organization
Museum of Zoology, Division of Birds
Side
--
Orientation
--
Short description
--
Full description
--
Creator
--
Date created
--
Date uploaded
April 13, 2021

FILE OBJECT DETAILS Field Definitions

File name
Ectopistes_migratorius_seeds_crop.stl
File format(s)
STL
File size
117 MB
Points
1226562
Polygons
2452884
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
53636.222, 46113.234, 34587.756
Centroid coordinates
38911.941, 22012.634, 50491.765
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000357454: Whole Individual [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Han Hu
Data uploaded by
Han Hu
Publication status
Open Download
Download reviewer
Han Hu
IP holder
Natural History Museum, London
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
Han Hu, Roger Benson
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/357578
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMZ:birds:68739 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
Creator
Benson, Roger
Event date
April 13, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.354
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2001
Voltage
214
Power
--
Amperage
269
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000357454: Whole Individual [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Benson, Roger
Event date
April 13, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000357454: Whole Individual [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000357454: Whole Individual [CTImageSeries] [CT] was processed to create derived Media 000357578: Seeds In Crop [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Han Hu, Roger Benson
Event date
April 14, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000357578: Seeds In Crop [Mesh] [CT] (this media)