Media 000358488: Skull
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UF:Herp:111243 Rana catesbeiana
Managed by
Jaimi Gray

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Related Media (3)

Media produced from the same original imaging that created Media 000358488 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000358488 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (2)

Other media associated with the original imaging that produced Media 000358488 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Open Download
Mesh
· Open Download

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Project
· Public

TAGS

GENERAL DETAILS Field Definitions

Media ID
000358488
Media type
Mesh
Object element or part
Skull
Object represented
UF:Herp:111243
Object taxonomy
Rana catesbeiana
Object organization
FLMNH Division of Herpetology
Side
NotApplicable
Orientation
--
Short description
Skull with colored elements
Full description
Skull with elements colored as seen in Blackburn Lab Sketchfab model: https://skfb.ly/6WKGU
Creator
--
Date created
--
Date uploaded
April 18, 2021

FILE OBJECT DETAILS Field Definitions

File name
Rana-catesbieanus-UF-herp-111243-skull.ply
File format(s)
PLY
File size
247 MB
Points
3164976
Polygons
1056351
Map type
--
UV coordinates
False
Vertex color
True
Bounding box dimensions
45.647, 48.303, 29.860
Centroid coordinates
3.412, 0.208, -0.474
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (1 step)
Derived directly from
Media 000101191: Whole Body [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jaimi Gray
Data uploaded by
Jaimi Gray
Publication status
Open Download
Download reviewer
Jaimi Gray
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
Agreement File

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/358488
MorphoSource DOI
Not assigned
External identifier
--
External media URL
https://skfb.ly/6WKGU

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:111243 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.333
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
1500
Voltage
80
Power
0.016
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000101191: Whole Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000101191: Whole Body [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000101191: Whole Body [CTImageSeries] [Etc] was processed with 1 activity to create derived Media 000358488: Skull [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
April 18, 2021
Software
Avizo
Description
Segmentation and mesh generation
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Avizo
Description
Skull elements isolated using segmentation editor and meshes generated

Media produced by this event on MorphoSource

Media 000358488: Skull [Mesh] [CT] (this media)