Media 000361685: M2, Cropped At Lowest Point Of Occlusal Basin
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
YPM:VP:YPM VP 018223 Metaphiomys schaubi
Managed by
Dorien de Vries

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000361685 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000361685 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

Mesh
ยท Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000361685
Media type
Mesh
Object element or part
m2, cropped at lowest point of occlusal basin
Object represented
YPM:VP:YPM VP 018223
Object taxonomy
Metaphiomys schaubi
Object organization
Vertebrate Paleontology Division, Yale Peabody Museum
Side
--
Orientation
--
Short description
This surface file is derived from a scan of the original specimen.
Full description
--
Creator
--
Date created
--
Date uploaded
April 30, 2021

FILE OBJECT DETAILS Field Definitions

File name
Metaphiomys_schaubi_YPM18223_m2_GM_Av_OB_8k_30sm_MD_flip.ply
File format(s)
PLY
File size
249 KB
Points
4082
Polygons
7999
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.835, 2.795, 0.776
Centroid coordinates
2.375, 3.821, 1.931
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (2 steps)
Derived directly from
Media 000361655: M2, Cropped Along Base Of Crown [Mesh] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical vivaCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Dorien de Vries
Data uploaded by
Dorien de Vries
Publication status
Open Download
Download reviewer
Dorien de Vries
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
Leakey Foundation and NSF BSC-1824745
Publisher
--
Cite as
Daniel Brinkman and Marilyn Fox provided access to this specimen. Data collection was funded by the Leakey Foundation and NSF BSC-1824745 awarded to D. de Vries.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/361685
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VP:YPM VP 018223 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
--
Event date
April 30, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000361655: M2, Cropped Along Base Of Crown [Mesh] [CT].

Processing Details Field Definitions

Creator
Dorien de Vries
Event date
April 30, 2021
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Description

Media produced by this event on MorphoSource

Media 000361655: M2, Cropped Along Base Of Crown [Mesh] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000361655: M2, Cropped Along Base Of Crown [Mesh] [CT] was processed with 1 activity to create derived Media 000361685: M2, Cropped At Lowest Point Of Occlusal Basin [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Dorien de Vries
Event date
April 30, 2021
Software
--
Description
--
Description attachment
None

Processing Activity 1: Crop

Software
Description

Media produced by this event on MorphoSource

Media 000361685: M2, Cropped At Lowest Point Of Occlusal Basin [Mesh] [CT] (this media)