Media 000371321: Vertebral Column
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000371321: Vertebral Column
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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Project
· Public
Team
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000371321
Media type
Mesh
Object element or part
Vertebral column
Object represented
Object taxonomy
Dromiciops australis
Object organization
Side
Midline
Orientation
--
Short description
--
Full description
--
Creator
Elizabeth Griffiths
Date created
July 23, 2021
Date uploaded
July 23, 2021
FILE OBJECT DETAILS Field Definitions
File name
Dromiciops_gliroides_UMMZ_156354_vertebrae_all.ply
File format(s)
PLY
File size
140 MB
Points
1853133
Polygons
3701876
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
20.839, 51.419, 80.780
Centroid coordinates
18.931, 18.355, 50.517
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
University of Michigan Museum of Zoology (Copyright and License)
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
University of Michigan, Museum of Zoology, 3600 Varsity Drive, Ann Arbor, Michigan 48108
Cite as
If the Digital Data were produced by the UMMZ, you agree that the attribution, in an acknowledgements section or similar will read:
“The data was provided courtesy of the University of Michigan Museum of Zoology.”
If the Digital Data represent a voucher specimen held by the UMMZ, the catalog number of the specimen must be referenced in the Specimen Examined or similar section in the manuscript (e.g., ummz:mammals:12345).
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UMMZ:mammals:156354
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
Creator
Roger Benson
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
110
Power
--
Amperage
135
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000068206: Whole Body [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
Roger Benson
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000068206: Whole Body [CTImageSeries] [CT]
was processed
to create
derived
Media 000371321: Vertebral Column [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Elizabeth Griffiths
Event date
--
Software
Avizo
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000371321: Vertebral Column [Mesh] [CT] (this media)