Media 000380587: Navicular
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000380587: Navicular
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
Related Media (1)
Child Media (1)
Mesh
· Restricted Download
In Collections
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000380587
Media type
Volumetric Image Series
Object element or part
navicular
Object represented
Object taxonomy
Dryomomys szalayi
Object organization
Side
Right
Orientation
--
Short description
--
Full description
--
Creator
doug boyer
Date created
June 22, 2011
Date uploaded
August 28, 2021
FILE OBJECT DETAILS Field Definitions
File name
UM_41870-78_Navicular.zip
File format(s)
ZIP archive, TIFF
File size
4.69 MB
Image width
140
Image height
160
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.008000
Y pixel spacing
0.008000
Z pixel spacing
0.008000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
97
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Regents of the University of Michigan
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS-1552848
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
ummp:vp:41870
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
doug boyer
Event date
June 22, 2011
Software
scanco medical
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
Transmission
Detector type
Scintillator (Phosphor used)
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
Area (single or tiled detector)
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
No
Optical magnification
No
Acquisition type
Sequenced
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 2 activities
to create
derived
Media 000380587: Navicular [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
doug boyer
Event date
June 22, 2011
Software
Avizo, scano medical
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
scanco medical
Description
Processing Activity 2: Crop
Software
Avizo
Description