Media 000408480: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UF:Herp:180711 Agama agama
Managed by
Digital Imaging Florida Museum

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Media produced from the same original imaging that created Media 000408480 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000408480
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
UF:Herp:180711
Object taxonomy
Agama agama
Object organization
FLMNH Division of Herpetology
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Jaimi Gray
Date created
March 15, 2021
Date uploaded
December 19, 2021

FILE OBJECT DETAILS Field Definitions

File name
Z-stack.zip
File format(s)
ZIP archive, TIFF
File size
238 MB
Image width
936
Image height
348
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.059784
Y pixel spacing
0.059784
Z pixel spacing
0.059784
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
3,010

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Digital Imaging Florida Museum
Data uploaded by
Jaimi Gray
Publication status
Open Download
Download reviewer
David Blackburn ; Digital Imaging Florida Museum
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
 No Known Copyright
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
Agreement File

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/408480
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:180711 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
March 15, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000408480: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
March 15, 2021
Software
GE reconstruction software and VG Studio Max
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000408480: Whole Body [CTImageSeries] [CT] (this media)