Media 000424886: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
YPM:VZ:YPM HERR 014621 Rhacodactylus leachianus
Managed by
Nelson Rios

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Media produced from the same original imaging that created Media 000424886 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000424886
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
YPM:VZ:YPM HERR 014621
Object taxonomy
Rhacodactylus leachianus
Object organization
Vertebrate Zoology Division - Herpetology, Yale Peabody Museum
Side
NotApplicable
Orientation
--
Short description
microCT volume and derivatives
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives Record created by batch submission.
Creator
--
Date created
--
Date uploaded
February 24, 2022

FILE OBJECT DETAILS Field Definitions

File name
YPM_VZ_YPM Herr 014621.zip
File format(s)
ZIP archive, TIFF
File size
198 MB
Image width
413
Image height
698
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.131485
Y pixel spacing
0.131485
Z pixel spacing
0.131485
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,880

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Nelson Rios
Data uploaded by
Sorilis Ruiz-Escobar
Publication status
Restricted Download
Download reviewer
Greg Watkins-Colwell
IP holder
Yale University
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN; NSF DBI-1701714; NSF DBI-1701769
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Yale University provided access to these data , the collection of which was funded by oVert TCN; NSF DBI-1701714; NSF DBI-1701769.. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/424886
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VZ:YPM HERR 014621 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zach Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
840
Voltage
100
Power
0.024
Amperage
240
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000424886: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Zach Randall
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000424886: Whole Body [CTImageSeries] [CT] (this media)