Media 000430664: Element Unspecified
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
sio:marine vertebrates:70379 Heterodontus japonicus
Managed by
Lauren Simonitis

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Media produced from the same original imaging that created Media 000430664 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000430664
Media type
Volumetric Image Series
Object element or part
--
Object represented
sio:marine vertebrates:70379
Object taxonomy
Heterodontus japonicus
Object organization
SIO Marine Vertebrate Collection
Side
--
Orientation
--
Short description
Japanese bullhead shark (Heterodontus japonicus)
Full description
--
Creator
Matthew Kolmann
Date created
May 26, 2017
Date uploaded
March 14, 2022

FILE OBJECT DETAILS Field Definitions

File name
H.japonicusS10_28um_2k_Rec_ZIP.zip
File format(s)
ZIP archive, TIFF
File size
11.4 GB
Image width
2240
Image height
224
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
28.000000
Y pixel spacing
28.000000
Z pixel spacing
28.000000
Pixel spacing units
--
Slice thickness
--
Number of images in set
5,597

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Lauren Simonitis
Data uploaded by
Lauren Simonitis
Publication status
Open Download
Download reviewer
Lauren Simonitis
IP holder
--
Copyright statement
 No Copyright - Non-Commercial Use Only
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/430664
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object sio:marine vertebrates:70379 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
Matthew Kolmann
Event date
May 26, 2017
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
65
Power
2k
Amperage
123
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
28um
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000430664: Element Unspecified [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000430664: Element Unspecified [CTImageSeries] [CT] (this media)