Media 000431071: Full Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000431071: Full Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000431071
Media type
Volumetric Image Series
Object element or part
full body
Object represented
Object taxonomy
Gasterosteus aculeatus
Object organization
Side
NotApplicable
Orientation
--
Short description
--
Full description
--
Creator
Wu, Tina
Date created
March 15, 2022
Date uploaded
March 15, 2022
FILE OBJECT DETAILS Field Definitions
File name
tw577_YPM_ICH_011179_fullbody_01.zip
File format(s)
ZIP archive, TIFF
File size
2.17 GB
Image width
895
Image height
862
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.031380
Y pixel spacing
0.031380
Z pixel spacing
0.031380
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,000
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Chemical and Biophysical Instrumentation Center (Yale University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Yale University
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701769; NSF DBI-1701714
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
YPM:VZ:YPM ICH 011179
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Chemical and Biophysical Instrumentation Center (Yale University)
Creator
Wu, Tina
Event date
March 08, 2022
Software
Inspect-X
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
1
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
3141
Voltage
73
Power
--
Amperage
71
Surrounding material
cheesecloth
X-ray tube type
--
Target type
Reflection
Detector type
--
Detector pixels X
2000
Detector pixels size X
0.2
Detector pixels Y
2000
Detector pixels size Y
0.2
Detector configuration
--
Source object distance
127.7377
Source detector distance
814.1295
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
Sequenced
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 1 activity
to create
derived
Media 000431071: Full Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Wu, Tina
Event date
March 15, 2022
Software
CT Pro
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
CT Pro
Description
Media produced by this event on MorphoSource
Media 000431071: Full Body [CTImageSeries] [CT] (this media)