Media 000432818: Torso, Pelvis
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
sbu:rs:SBU Nat20 Ateles sp.
Managed by
Stephanie Maiolino

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Media produced from the same original imaging that created Media 000432818 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000432818
Media type
Volumetric Image Series
Object element or part
Torso, Pelvis
Object represented
sbu:rs:SBU Nat20
Object taxonomy
Ateles sp.
Object organization
Anatomical Sciences Collection
Side
--
Orientation
--
Short description
Elements from both sides are represented in the scan.
Full description
--
Creator
Ashley Hammond
Date created
December 11, 2014
Date uploaded
March 29, 2022

FILE OBJECT DETAILS Field Definitions

File name
DICOM Nat20 torso.zip
File format(s)
ZIP archive, DICOM
File size
325 MB
Image width
512
Image height
512
Color space
--
Color depth
16
Compression
--
Series type
Reconstructed image stack
X pixel spacing
0.361328
Y pixel spacing
0.361328
Z pixel spacing
0.187000
Pixel spacing units
Mm
Slice thickness
0.625000
Number of images in set
1,696

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric LightSpeed VCT 64-slice CT, Stony Brook University Medical Center (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Stephanie Maiolino
Data uploaded by
Eva Fuentes
Publication status
Open Download
Download reviewer
--
IP holder
Stony Brook University, Dept of Anatomical Sciences
Copyright statement
 Copyright Undetermined
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
When re-using this media, please follow all citation provisions of its MorphoSource Reuse Agreement, acknowledge grants in the Funding Attribution field for this media, and cite Almecija et al. (2023: doi:XXX).
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/432818
MorphoSource DOI
 10.17602/M2/M432818
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object sbu:rs:SBU Nat20 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Medical Center (Stony Brook University)
Creator
Ashley Hammond
Event date
December 11, 2014
Software
--
Description
DICOM stacks that can be opened in most versions of AMIRA or AVIZO without needing additional input for scale (i.e., the voxel resolution is recognized). This file can also be opened in ImageJ but will require the user to scale the images with provided information on the voxel dimensions prior to working with them.
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000432818: Torso, Pelvis [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Ashley Hammond
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000432818: Torso, Pelvis [CTImageSeries] [CT] (this media)