Media 000436315: Full Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000436315
Media type
Volumetric Image Series
Object element or part
full body
Object represented
Object taxonomy
Lepisosteus platostomus
Side
NotApplicable
Orientation
--
Short description
--
Full description
--
Creator
Zhang, Alice
Date created
April 26, 2022
Date uploaded
April 26, 2022

FILE OBJECT DETAILS Field Definitions

File name
tw577_YPM_ICH_015102_Full_01.zip
File format(s)
ZIP archive, TIFF
File size
4.51 GB
Image width
1791
Image height
962
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.096650
Y pixel spacing
0.096650
Z pixel spacing
0.096650
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,000

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Chemical and Biophysical Instrumentation Center (Yale University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Yale University
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701769; NSF DBI-1701714
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VZ:YPM ICH 015102 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Chemical and Biophysical Instrumentation Center (Yale University)
Creator
Wu, Tina
Event date
April 19, 2022
Software
Inspect-X
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
3141
Voltage
89
Power
--
Amperage
89
Surrounding material
cheesecloth
X-ray tube type
--
Target type
Reflection
Detector type
--
Detector pixels X
2000
Detector pixels size X
0.2
Detector pixels Y
2000
Detector pixels size Y
0.2
Detector configuration
--
Source object distance
538.403300
Source detector distance
1114.129000
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
Sequenced

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000436315: Full Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Zhang, Alice
Event date
April 26, 2022
Software
CT Pro
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
CT Pro
Description

Media produced by this event on MorphoSource

Media 000436315: Full Body [CTImageSeries] [CT] (this media)