Media 000438970: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UCM:Herp:UCM:Herp:42079 Aspidoscelis opatae
Managed by
Emily Braker

Request Download Add to Cart

Login or create an account to download files

Media Display

Related Media (0)

Media produced from the same original imaging that created Media 000438970 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000438970
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
UCM:Herp:UCM:Herp:42079
Object taxonomy
Aspidoscelis opatae
Object organization
UCM Herpetology Collection
Side
--
Orientation
--
Short description
microCT volume, zipped 16-bit tiff stack
Full description
Migrated MorphoSource 1 Media Group Title: microCT volume, zipped 16-bit tiff stack Migrated MorphoSource 1 Media File Description: Data inverted following reconstruction Record created by batch submission.
Creator
--
Date created
--
Date uploaded
May 03, 2022

FILE OBJECT DETAILS Field Definitions

File name
UCM_HERP_42079_Aspidoscelis_opatae.zip
File format(s)
ZIP archive, TIFF
File size
5.59 GB
Image width
1491
Image height
3666
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.027684
Y pixel spacing
0.027684
Z pixel spacing
0.027684
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
751

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Emily Braker
Data uploaded by
Mackenzie Shepard
Publication status
Restricted Download
Download reviewer
Emily Braker
IP holder
University of Colorado Museum of Natural History
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oMeso PEN NSF DBI-2001474; oVert TCN partner NSF DBI-1701714
Publisher
--
Cite as
University of Colorado Museum of Natural History provided access to these data with data collection funded by NSF 2001474. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/438970
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCM:Herp:UCM:Herp:42079 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Braker, Emily
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1.700000048
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
1601
Voltage
120
Power
9.96e-06
Amperage
75
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000438970: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Braker, Emily
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000438970: Whole Body [CTImageSeries] [CT] (this media)