Media 000439273: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UCM:Herp:UCM:Herp:19028 Xenosaurus rackhami rackhami
Managed by
Emily Braker

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000439273 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (1)

Derived media that were created from processing Media 000439273 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000439273
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
UCM:Herp:UCM:Herp:19028
Object taxonomy
Xenosaurus rackhami rackhami
Object organization
UCM Herpetology Collection
Side
--
Orientation
--
Short description
microCT volume, zipped 16-bit tiff stack
Full description
Migrated MorphoSource 1 Media Group Title: microCT volume, zipped 16-bit tiff stack Migrated MorphoSource 1 Media File Description: Data inverted following reconstruction Record created by batch submission.
Creator
--
Date created
--
Date uploaded
May 04, 2022

FILE OBJECT DETAILS Field Definitions

File name
UCM_HERP_19028_Xenosaurus_rackhami_rackhami.zip
File format(s)
ZIP archive, TIFF
File size
9.61 GB
Image width
994
Image height
4190
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.029149
Y pixel spacing
0.029149
Z pixel spacing
0.029149
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,081

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Emily Braker
Data uploaded by
Mackenzie Shepard
Publication status
Restricted Download
Download reviewer
Emily Braker
IP holder
University of Colorado Museum of Natural History
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oMeso PEN NSF DBI-2001474; oVert TCN partner NSF DBI-1701714
Publisher
--
Cite as
University of Colorado Museum of Natural History provided access to these data with data collection funded by NSF 2001474. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/439273
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCM:Herp:UCM:Herp:19028 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Touslee, Claire
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1.799999952
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
1601
Voltage
150
Power
1.0e-05
Amperage
66.66666667
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000439273: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Touslee, Claire
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000439273: Whole Body [CTImageSeries] [CT] (this media)