Media 000450265: Femur
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
dlc:6205f Varecia variegata rubra
Managed by
Douglas Boyer

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Related Media (1)

Media produced from the same original imaging that created Media 000450265 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000450265 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000450265
Media type
Mesh
Object element or part
femur
Object represented
dlc:6205f
Object taxonomy
Varecia variegata rubra
Object organization
Duke Lemur Center
Side
Left
Orientation
--
Short description
from articulated individual
Full description
--
Creator
doug boyer
Date created
July 14, 2022
Date uploaded
July 15, 2022

FILE OBJECT DETAILS Field Definitions

File name
DLC6205f_Varecia_rubra_femur.ply
File format(s)
PLY
File size
84.8 MB
Points
1156864
Polygons
2313720
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
112.107, 43.160, 100.722
Centroid coordinates
221.058, 79.899, 122.589
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (1 step)
Derived directly from
Media 000170752: Full Body [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Douglas Boyer
Publication status
Restricted Download
Download reviewer
Duke Lemur Center Museum of Natural History; Douglas Boyer
IP holder
Duke Lemur Center
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/450265
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object dlc:6205f was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Gabriel Yapuncich
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.354
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
2
Projections
2000
Voltage
140
Power
--
Amperage
310
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000170752: Full Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Gabriel Yapuncich
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000170752: Full Body [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000170752: Full Body [CTImageSeries] [Etc] was processed with 1 activity to create derived Media 000450265: Femur [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
doug boyer
Event date
July 14, 2022
Software
avizo
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
avizo
Description
used segmentation editor to extract left femur

Media produced by this event on MorphoSource

Media 000450265: Femur [Mesh] [CT] (this media)