Media 000453361: Astragalus
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
um:32276 Omomys sp.
Managed by
Douglas Boyer

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Related Media (1)

Media produced from the same original imaging that created Media 000453361 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000453361 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
ยท Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000453361
Media type
Mesh
Object element or part
Astragalus
Object represented
um:32276
Object taxonomy
Omomys sp.
Object organization
Museum of Paleontology
Side
Right
Orientation
--
Short description
--
Full description
--
Creator
--
Date created
August 01, 2022
Date uploaded
August 01, 2022

FILE OBJECT DETAILS Field Definitions

File name
_UM_32276_R_Ast_Omomyidae_MESH.ply
File format(s)
PLY
File size
36.1 MB
Points
499993
Polygons
999988
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.746, 4.548, 8.249
Centroid coordinates
2.752, 2.508, 3.588
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (4 steps)
Derived directly from
Media 000453358: Astragalus [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Wyatt Pell
Publication status
Restricted Download
Download reviewer
Douglas Boyer
IP holder
--
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/453361
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object um:32276 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
--
Projections
3142
Voltage
130
Power
--
Amperage
124
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 2 activities to create derived Media 000453358: Astragalus [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
--
Software
Avizo
Description
--
Description attachment
None

Processing Activity 1: Crop

Software
Avizo
Description

Processing Activity 2: Transform: Reflection

Software
Avizo
Description
Wyatt Pell

Media produced by this event on MorphoSource

Media 000453358: Astragalus [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000453358: Astragalus [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000453361: Astragalus [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
Avizo
Description
--
Description attachment
None

Processing Activity 1: Transform: Reflection

Software
Avizo
Description
Wyatt Pell

Processing Activity 2: Reconstructed Tomography to Mesh

Software
Avizo
Description
Wyatt Pell

Media produced by this event on MorphoSource

Media 000453361: Astragalus [Mesh] [CT] (this media)