Media 000472710: Entire Specimen
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
SIO:Marine Vertebrates:85-16 Neocyttus rhomboidalis
Managed by
Laura Rincón

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Media produced from the same original imaging that created Media 000472710 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000472710
Media type
Volumetric Image Series
Object element or part
Entire specimen
Object represented
SIO:Marine Vertebrates:85-16
Object taxonomy
Neocyttus rhomboidalis
Object organization
SIO Marine Vertebrate Collection
Side
NotApplicable
Orientation
--
Short description
microCT volume and derivatives
Full description
Record created by batch submission.
Creator
Zach Randall
Date created
--
Date uploaded
October 06, 2022

FILE OBJECT DETAILS Field Definitions

File name
SIO_Marine Vertebrates_85-16.zip
File format(s)
ZIP archive, TIFF
File size
270 MB
Image width
598
Image height
1281
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.055063
Y pixel spacing
0.055063
Z pixel spacing
0.055063
Pixel spacing units
Mm
Slice thickness
0.05506329
Number of images in set
1,837

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Laura Rincón
Data uploaded by
Laura Rincón
Publication status
Open Download
Download reviewer
Laura Rincón
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/472710
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object SIO:Marine Vertebrates:85-16 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zach Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200.098
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1680
Voltage
100
Power
0.02
Amperage
200
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
2024
Detector pixels size X
0.2
Detector pixels Y
2024
Detector pixels size Y
0.2
Detector configuration
Area (single or tiled detector)
Source object distance
221.01725
Source detector distance
802.77534791
Target material
tungston
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000472710: Entire Specimen [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Zach Randall
Event date
--
Software
DatosX|R
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000472710: Entire Specimen [CTImageSeries] [CT] (this media)