Media 000476445: Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
YPM:VZ:YPM HERA 023168 Potamotyphlus kaupii
Managed by
Nelson Rios

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Media produced from the same original imaging that created Media 000476445 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000476445
Media type
Volumetric Image Series
Object element or part
body
Object represented
YPM:VZ:YPM HERA 023168
Object taxonomy
Potamotyphlus kaupii
Object organization
Vertebrate Zoology Division - Herpetology, Yale Peabody Museum
Side
NotApplicable
Orientation
--
Short description
microCT volume and derivatives
Full description
Record created by batch submission.
Creator
Zach Randall
Date created
--
Date uploaded
October 21, 2022

FILE OBJECT DETAILS Field Definitions

File name
YPM_VZ_YPM-Hera-A23168.zip
File format(s)
ZIP archive, TIFF
File size
1.65 GB
Image width
700
Image height
700
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.033046
Y pixel spacing
0.033046
Z pixel spacing
0.033046
Pixel spacing units
Mm
Slice thickness
0.03304625
Number of images in set
2,014

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Nelson Rios
Data uploaded by
Laura Rincón
Publication status
Restricted Download
Download reviewer
Greg Watkins-Colwell
IP holder
Yale University
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/476445
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VZ:YPM HERA 023168 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zach Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
250.097
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
840
Voltage
60
Power
0.009
Amperage
150
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
2024
Detector pixels size X
0.2
Detector pixels Y
2024
Detector pixels size Y
0.2
Detector configuration
Area (single or tiled detector)
Source object distance
132.6435625
Source detector distance
802.77534791
Target material
tungston
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000476445: Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Zach Randall
Event date
--
Software
DatosX|R
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000476445: Body [CTImageSeries] [CT] (this media)