Media 000495449: Vagina
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000495449: Vagina
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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Team
· Public
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000495449
Media type
Mesh
Object element or part
Vagina
Object represented
Object taxonomy
Macrobdella mimicus
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Goetz, Freya
Date created
January 31, 2023
Date uploaded
February 01, 2023
FILE OBJECT DETAILS Field Definitions
File name
M_mimicus-AJP0036_2-USNM1593613-vagina.ply
File format(s)
PLY
File size
588 KB
Points
9002
Polygons
17998
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.700, 2.437, 3.329
Centroid coordinates
0.809, 0.896, -1.292
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(2 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m, Micro-Computed Tomography Imaging Center (mCTIC) (National Museum of Natural History, Smithsonian Institution)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Smithsonian Institution, National Museum of Natural History
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
USNM:IZ:USNM 1593613
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Micro-Computed Tomography Imaging Center (mCTIC) (National Museum of Natural History, Smithsonian Institution)
Creator
Goetz, Freya; Phillips, Anna
Event date
May 01, 2018
Software
datos
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
1000ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
2
Projections
1200
Voltage
140
Power
--
Amperage
60
Surrounding material
air and plastic bag with residual ethanol
X-ray tube type
GE Phoenix v|tome|x Nano Tube 180kV
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 1 activity
to create
derived
Media 000495102: Reproductive Area [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
Goetz, Freya
Event date
May 01, 2018
Software
datos
Description
raw CT projections reconstructed into slices
Description attachment
None
Processing Activity 1: Reconstruction
Software
datos
Description
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000495102: Reproductive Area [CTImageSeries] [CT]
was processed
with 1 activity
to create
derived
Media 000495449: Vagina [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Goetz, Freya
Event date
January 31, 2023
Software
Amira 2022.1
Description
--
Description attachment
None
Processing Activity 1: Reconstructed Tomography to Mesh
Software
Description