Media 000503112: Endocranial Cast
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000503112: Endocranial Cast
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
TAGS
GENERAL DETAILS Field Definitions
Media ID
000503112
Media type
Mesh
Object element or part
Endocranial cast
Object represented
Object taxonomy
Pteropus pumilus
Object organization
Side
NotApplicable
Orientation
--
Short description
--
Full description
--
Creator
Jacob Maugoust
Date created
March 23, 2021
Date uploaded
March 14, 2023
FILE OBJECT DETAILS Field Definitions
File name
Pteropus_pumilus_UMMZ-162253.ply
File format(s)
PLY
File size
93 MB
Points
1340633
Polygons
2681270
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
15.918, 30.950, 18.480
Centroid coordinates
10.158, 30.967, 14.478
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 100, University of Michigan School of Dentistry MicroCT Core (University of Michigan)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
University of Michigan Museum of Zoology (Copyright and License)
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UMMZ:mammals:162253
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
University of Michigan School of Dentistry MicroCT Core (University of Michigan)
Creator
Michelle Lynch, Jeff Shi, Erin Westeen
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
750
Voltage
70
Power
0.007980000000000001
Amperage
114
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000035634: Cranium [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
Michelle Lynch, Jeff Shi, Erin Westeen
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000035634: Cranium [CTImageSeries] [CT]
was processed
to create
derived
Media 000503112: Endocranial Cast [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Jacob Maugoust
Event date
March 23, 2021
Software
Avizo 9.3.0
Description
Endocast was extracted from micro-CT data of cranium using the software Avizo 9.3.0 and its “lasso” and “brush” tools together with grayscale thresholds
Description attachment
None
Media produced by this event on MorphoSource
Media 000503112: Endocranial Cast [Mesh] [CT] (this media)