Media 000558712: Lower Second Molar (Cast)
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
USNM:MAMM:USNM 397870 Saguinus mystax
Managed by
Department of Vertebrate Zoology National Museum of Natural History

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Media Display

Related Media (2)

Media produced from the same original imaging that created Media 000558712 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top)

The first media in the imaging and processing workflow that produced Media 000558712 (this media). The media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

Parent Media (Direct)

The media that was processed to create Media 000558712 (this media). The media immediately preceding this media in the imaging and processing workflow.

In Collections

Team
· Public

TAGS

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GENERAL DETAILS Field Definitions

Media ID
000558712
Media type
Mesh
Object element or part
lower second molar (cast)
Object represented
USNM:MAMM:USNM 397870
Object taxonomy
Saguinus mystax
Object organization
NMNH - Division of Mammals
Side
--
Orientation
--
Short description
reconstructed, simplified, and smoothed
Full description
--
Creator
--
Date created
September 13, 2023
Date uploaded
September 13, 2023

FILE OBJECT DETAILS Field Definitions

File name
Saguinus_mystax_USNM397870_m2_cropped_MM_orient_clean_10k_smHCL.ply
File format(s)
PLY
File size
187 KB
Points
5070
Polygons
9998
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.154, 2.550, 1.458
Centroid coordinates
0.017, -0.056, -0.016
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
2
Number of processing events
3 (3 steps)
Derived directly from
Media 000476576: Second Mandibular Molar [Mesh] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Department of Vertebrate Zoology National Museum of Natural History
Data uploaded by
Dorien de Vries
Publication status
Open Download
Download reviewer
Department of Vertebrate Zoology National Museum of Natural History
IP holder
Smithsonian Institution, National Museum of Natural History
Copyright statement
 Copyright Undetermined
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/558712
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:MAMM:USNM 397870 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000476573: Second Mandibular Molar [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
Description

Media produced by this event on MorphoSource

Media 000476573: Second Mandibular Molar [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Description

Media produced by this event on MorphoSource

Media 000476576: Second Mandibular Molar [Mesh] [CT]

STEP 4: IMAGE PROCESSING

Derived Media 000476576: Second Mandibular Molar [Mesh] [CT] was processed with 1 activity to create derived Media 000558712: Lower Second Molar (Cast) [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Simplification

Software
MeshLab
Description

Media produced by this event on MorphoSource

Media 000558712: Lower Second Molar (Cast) [Mesh] [CT] (this media)