Media 000582632: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000582632
Media type
Volumetric Image Series
Object element or part
Whole Body
Object represented
Object taxonomy
Trematomus lepidorhinus
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
T. R. Clardy
Date created
October 25, 2023
Date uploaded
November 20, 2023

FILE OBJECT DETAILS Field Definitions

File name
LACMfishes11471_3_Rec.zip
File format(s)
ZIP archive, PNG
File size
1.71 GB
Image width
1520
Image height
1520
Color space
--
Color depth
--
Compression
Deflate; Deflate/Inflate
X pixel spacing
21.000000
Y pixel spacing
21.000000
Z pixel spacing
21.000000
Pixel spacing units
Um
Slice thickness
--
Number of images in set
3,890

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1273, LACM Ichthyology (Natural History Museums of Los Angeles County)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
Natural History Museum of Los Angeles County
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On Any Repository
Funding attribution
NSF-DBI 2215184
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object LACM:Fish:11471.003 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
LACM Ichthyology (Natural History Museums of Los Angeles County)
Creator
T R Clardy
Event date
October 25, 2023
Software
--
Description
Head only
Description attachment
None
Reference attachment
None
Exposure time
600 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
--
Voltage
80 kV
Power
--
Amperage
187 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
21
Detector pixels size X
21
Detector pixels Y
21
Detector pixels size Y
21
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
Sequenced

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 2 activities to create derived Media 000582632: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
T. R. Clardy
Event date
October 25, 2023
Software
NRecon
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
NRecon
Description

Processing Activity 2: Crop

Software
NRecon
Description

Media produced by this event on MorphoSource

Media 000582632: Whole Body [CTImageSeries] [CT] (this media)