Media 000583535: Element Unspecified
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

TAGS

GENERAL DETAILS Field Definitions

Media ID
000583535
Media type
Volumetric Image Series
Object element or part
--
Object represented
Object taxonomy
Asio flammeus
Side
--
Orientation
--
Short description
Specimen of Asio flammeus with right head turn with stright neck.
Full description
Specimen of adult Asio flammeus with right head turn with stright neck. Part of study of the three-dimensional configuration of owl's neck in extreme head turn. Field number #53. Presented in publications as Asio flammeus #2.
Creator
Aleksandra Panytina
Date created
September 20, 2020
Date uploaded
November 29, 2023

FILE OBJECT DETAILS Field Definitions

File name
Asio-flammeus_53_straight-twisted.zip
File format(s)
ZIP archive, DICOM
File size
3.03 GB
Image width
1000
Image height
1000
Color space
--
Color depth
16
Compression
--
Series type
Reconstructed image stack
X pixel spacing
0.094203
Y pixel spacing
0.094203
Z pixel spacing
0.094203
Pixel spacing units
Mm
Slice thickness
0.0942029
Number of images in set
2,024

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric Phoenix V|tome|x M300, All Russian Scientific Research Institute of Radio Electronics FGBU VNIIR (All Russian Scientific Research Institute of Radio Electronics FGBU VNIIR)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object zmmu:msu:2020-53 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
All Russian Scientific Research Institute of Radio Electronics FGBU VNIIR (All Russian Scientific Research Institute of Radio Electronics FGBU VNIIR)
Creator
--
Event date
September 02, 2020
Software
Phoenix datos|x
Description
Specimen of adult Asio flammeus with right head turn with stright neck. Part of study of the three-dimensional configuration of owl's neck in extreme head turn. Field number #53. Presented in publications as Asio flammeus #2.
Description attachment
Reference attachment
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1200
Voltage
150
Power
--
Amperage
100
Surrounding material
PET bottle and polyethylene pieces
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
2024
Detector pixels size X
--
Detector pixels Y
2024
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000583535: Element Unspecified [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
September 20, 2020
Software
Phoenix datos|x
Description
Obtained raw projection data from the scanner (back projections) were converted into volume with the software shipped with the Phoenix V|tome|x scanner (Phoenix datos|x). Then, series of cross-section images (slices) were exported from the volume and saved in DICOM format. At this step, the software always reverses the right-left polarity (Z axis direction) of the specimen relative to its cranial-caudal polarity. Therefore, the left and the right are reversed in DICOM presentation. The correct orientation can be seen in illustration included in description.
Description attachment
None

Processing Activity 1: Crop

Software
Phoenix datos|x
Description

Media produced by this event on MorphoSource

Media 000583535: Element Unspecified [CTImageSeries] [CT] (this media)