Media 000602897: Forelimb
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
mcz:157440 Neoceratodus fosteri
Managed by
Harvard - Museum of Comparative Zoology

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000602897 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000602897 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000602897
Media type
Mesh
Object element or part
Forelimb
Object represented
mcz:157440
Object taxonomy
Neoceratodus fosteri
Object organization
MCZ Ichthyology
Side
Right
Orientation
--
Short description
Right forelimb with elements colored to demonstrate forelimb anatomy
Full description
Skeleton of the right pectoral fin of the Australian lungfish, *Neoceratodus forsteri* (specimen MCZ 157440), with elements colored to demonstrate forelimb anatomy. Scene created by Jaimi Gray (oVert team). Prexisting meshes (see below) were colored using *Meshlab*. This specimen was scanned and original meshes created by Thomas Stewart for **Stewart et al. 2019 PNAS**, "Fin ray patterns at the fin-to-limb transition". See the paper here: https://www.pnas.org/content/117/3/1612
Creator
Jaimi Gray
Date created
February 07, 2024
Date uploaded
February 07, 2024

FILE OBJECT DETAILS Field Definitions

File name
lungfish_forelimb_with_color.ply
File format(s)
PLY
File size
42 MB
Points
880586
Polygons
1760800
Map type
--
UV coordinates
True
Vertex color
True
Bounding box dimensions
1517.050, 174.614, 352.982
Centroid coordinates
4.331, -5.657, -0.516
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000097859: Neoceratodus Pectoral Fin [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology HMX ST 225, Center for Nanoscale Systems (Harvard University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Harvard - Museum of Comparative Zoology
Data uploaded by
Jaimi Gray
Publication status
Restricted Download
Download reviewer
Andrew Williston
IP holder
President and Fellows of Harvard College (Copyright and License)
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC-ND Attribution-NonCommercial-NoDerivs 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://mcz.harvard.edu/permissions-copyright

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/602897
MorphoSource DOI
Not assigned
External identifier
--
External media URL
https://skfb.ly/6TQB9

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object mcz:157440 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Center for Nanoscale Systems (Harvard University)
Creator
Natalia K. Taft
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
75
Power
0.0105
Amperage
140
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000097859: Neoceratodus Pectoral Fin [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Natalia K. Taft
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000097859: Neoceratodus Pectoral Fin [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000097859: Neoceratodus Pectoral Fin [CTImageSeries] [Etc] was processed to create derived Media 000602897: Forelimb [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
February 07, 2024
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000602897: Forelimb [Mesh] [CT] (this media)