Media 000602932: Forelimb
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
KU:KUO:56667 Egretta thula
Managed by
Jaimi Gray

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Related Media (2)

Media produced from the same original imaging that created Media 000602932 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000602932 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000602932 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Restricted Download

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000602932
Media type
Mesh
Object element or part
Forelimb
Object represented
KU:KUO:56667
Object taxonomy
Egretta thula
Object organization
KUBI Ornithology Collection
Side
Right
Orientation
--
Short description
Right forelimb with elements colored to demonstrate forelimb anatomy
Full description
Skeleton of the right wing of a snowy egret, Egretta tula (specimen KU Birds 56667), a fluid-preserved specimen from the collections of the University of Kansas Natural History Museum, with elements colored to demonstrate forelimb anatomy. This scene was created by Jaimi Gray (oVert team) using pre-existing mesh files (see below) which were edited to separate, reposition, and color elements in Blender and Meshlab. Segmentation and original mesh files made by Karina Riddell using Volumegraphics VGStudioMax 3.3. The model was generated to complement a learning activity designed during the UF Center for Precollegiate Education and Training workshop “3D Vertebrates: From Museum Shelves to Classrooms.” Scanning and modeling of this specimen was funded by the oVert project at the University of Florida (NSF DBI 1701714, https://tinyurl.com/oVertwiki).
Creator
Jaimi Gray
Date created
February 07, 2024
Date uploaded
February 07, 2024

FILE OBJECT DETAILS Field Definitions

File name
egret_forelimb_with_color.ply
File format(s)
PLY
File size
16.5 MB
Points
341218
Polygons
697575
Map type
--
UV coordinates
True
Vertex color
True
Bounding box dimensions
221.142, 30.760, 74.770
Centroid coordinates
-11.615, 7.659, -6.167
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000085076: Element Unspecified [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jaimi Gray
Data uploaded by
Jaimi Gray
Publication status
Restricted Download
Download reviewer
Lucas DeCicco
IP holder
--
Copyright statement
 No Copyright - Non-Commercial Use Only
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/602932
MorphoSource DOI
Not assigned
External identifier
--
External media URL
https://skfb.ly/6TNso

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object KU:KUO:56667 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Stephanie Baumgart, Daryl Coldren
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.250094
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
1200
Voltage
150
Power
0.045
Amperage
300
Surrounding material
Air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000085076: Element Unspecified [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Stephanie Baumgart, Daryl Coldren
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000085076: Element Unspecified [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000085076: Element Unspecified [CTImageSeries] [CT] was processed to create derived Media 000602932: Forelimb [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
February 07, 2024
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000602932: Forelimb [Mesh] [CT] (this media)