Media 000607376: Wrist
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
amnh:239876 Phyllostomus hastatus curaca
Managed by
Jessie Maisano

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Media produced from the same original imaging that created Media 000607376 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000607376
Media type
Volumetric Image Series
Object element or part
wrist
Object represented
amnh:239876
Object taxonomy
Phyllostomus hastatus curaca
Object organization
unassigned
Side
--
Orientation
--
Short description
HRXCT scan of wrist
Full description
Phyllostomus/wrist: Scans of the wrist of Phyllostomus hastatus curaca (AMNH 239876; Peru, Oxapampa Province; Pasco, Nevati, original number MDT-1798, collected by M.D. Tuttle) for Dr. Nancy Simmons of the American Museum of Natural History and Dr. Timothy Rowe of the Department of Geological Sciences, The University of Texas at Austin. Scanned by Matthew Colbert 24 December 2003. 16bitrot: 512x512 16-bit TIFF images. II, 180 kV, 0.133 mA, no filter, empty container wedge, no offset, slice thickness 1 line (= 0.0347 mm), S.O.D. 100 mm, 1000 views, 2 samples per view, inter-slice spacing 1 line (= 0.0347 mm), field of reconstruction 19 mm (maximum field of view 32.77036 mm), reconstruction offset 7300, reconstruction scale 2000. Reconstructed off-center: x = -2, y = -6.3. Acquired with 27 slices per rotation. Rotation correction processing done by Rachel Racicot using IDL routine “DoRotationCorrection”. Total slices = 216. Deleted original slices 217-270.
Creator
Matthew Colbert
Date created
December 24, 2003
Date uploaded
February 27, 2024

FILE OBJECT DETAILS Field Definitions

File name
16bitrot.zip
File format(s)
ZIP archive, TIFF
File size
55.1 MB
Image width
335
Image height
476
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.037100
Y pixel spacing
0.037100
Z pixel spacing
0.034700
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
216

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jessie Maisano
Data uploaded by
Lauren Nguyen
Publication status
Restricted Download
Download reviewer
Jessie Maisano
IP holder
American Museum of Natural History
Copyright statement
 In Copyright
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242, IIS-0208675
Publisher
oUTCT PEN
Cite as
Nancy Simmons provided access to these data, with data collection funded by NSF DEB-9873663 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/607376
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object amnh:239876 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
December 24, 2003
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000607376: Wrist [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000607376: Wrist [CTImageSeries] [CT] (this media)