Media 000618725: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000618725: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
GENERAL DETAILS Field Definitions
Media ID
000618725
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Schistocerca sp.
Object organization
Side
--
Orientation
--
Short description
HRXCT scan - whole body
Full description
University of Texas High-Resolution X-ray CT Facility Archive 0896
Rowe:
Schistocerca: Scans of the whole body of Schistocerca emarginatum (Texas: Travis Co., Austin, Brackenridge Field Laboratory; 1 August 2003; A. D. Smith) for Dr. John Abbott of the Department of Integrative Biology, The University of Texas at Austin, Dr. Timothy Rowe of the Department of Geological Sciences, The University of Texas at Austin, and Digimorph. Specimen scanned by Matthew Colbert 8 August 2003. This specimen was scanned from back to front, so after reconstruction the images were renumbered and flipped to conform with typical ‘front-to-back’ orientation.
16bitrf: 1024x1024 16-bit TIFF images. II, 120 kV, 0.2 mA, no filter, air wedge, no offset, slice thickness 2 lines (= 0.085 mm), S.O.D. 123 mm, 1600 views, 3 samples per view, inter-slice spacing 2 lines (= 0.085 mm), field of reconstruction 40 mm (maximum field of view 40.26814 mm), reconstruction offset 11000, reconstruction scale 3000. Acquired with 15 slices per rotation. Flash- and ring-removal processing done by Rachel Racicot based on correction of raw sinogram data using IDL routines “RK_SinoDeSpike”, and “RK_SinoRingProcSimul”, both with default parameters. Total slices = 1035.
Creator
Matthew Colbert
Date created
August 08, 2003
Date uploaded
April 04, 2024
FILE OBJECT DETAILS Field Definitions
File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
903 MB
Image width
921
Image height
637
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.039000
Y pixel spacing
0.039000
Z pixel spacing
0.085000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,035
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Texas Memorial Museum
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242, IIS-0208675
Publisher
oUTCT PEN
Cite as
Funding for scanning was provided by NSF grant IIS-0208675 to Tim Rowe. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
none:none
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
--
Event date
--
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
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Detector configuration
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Source object distance
--
Source detector distance
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Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000618725: Whole Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None