Media 000624685: Skull
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000624685: Skull
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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TAGS
GENERAL DETAILS Field Definitions
Media ID
000624685
Media type
Volumetric Image Series
Object element or part
skull
Object represented
Object taxonomy
Aptenodytes forsteri
Object organization
Side
--
Orientation
--
Short description
HRXCT scan- skull
Full description
University of Texas High-Resolution X-ray CT Facility Archive 1276
Triche:
Aptenodytes: Scans of the skull and mandible of Aptenodytes forsteri (UF 22281) for Nina Triche of The University of Texas at Austin Department of Geological Sciences. Specimen scanned by Matthew Colbert 18 July 2005 in 2 parts (240 and 690 slices), due to specimen size.
16bit: 1024x1024 16-bit TIFF images. II, 180 kV, 0.133 mA, no filter, empty container wedge, no offset, slice thickness 2 lines (= 0.199 mm), S.O.D. 290 mm, 1000 views, 2 samples per view, inter-slice spacing 2 lines (= 0.199 mm), field of reconstruction 95 mm (maximum field of view 95.034 mm), reconstruction offset 6100, scanner scale 6100, reconstruction scale 2000. Acquired with 15 slices per rotation. Drift correction done based on raw sinogram data using IDL routine “RK_SinoDeDrift” with parameter “driftlength=21.” After sets were merged and matched, overlapping slices 227-240. Total final slices = 916.
Creator
Matthew Colbert
Date created
July 18, 2005
Date uploaded
April 30, 2024
FILE OBJECT DETAILS Field Definitions
File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
904 MB
Image width
768
Image height
878
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.199000
Y pixel spacing
0.199000
Z pixel spacing
0.928000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
916
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
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IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UF:Birds:22281
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
--
Event date
July 18, 2005
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
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Flux normalization
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Pixel spacing calibration
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Shading correction
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Frame averaging
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Projections
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Voltage
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Power
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Amperage
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Surrounding material
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X-ray tube type
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Target type
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Detector type
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Detector pixels X
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Detector pixels size X
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Detector pixels Y
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Detector pixels size Y
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Detector configuration
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Source object distance
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Source detector distance
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Target material
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Rotation number
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Phase contrast
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Optical magnification
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Acquisition type
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STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000624685: Skull [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000624685: Skull [CTImageSeries] [CT] (this media)