Media 000636297: Braincase
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000636297
Media type
Volumetric Image Series
Object element or part
braincase
Object represented
Object taxonomy
Shuvuuia deserti
Side
--
Orientation
--
Short description
HRXCT scan -- braincase
Full description
University of Texas High-Resolution X-ray CT Facility Archive 1859 Sipla: shear: Scans of the braincase of Shuvuuia (IGM 100/1099; Mongolian) for Justin Sipla of the University of Texas at El Paso. Specimen scanned by Matthew Colbert 28 May 2008. 16bit: 1024x1024 16-bit TIFF images. II, 200 kV, 0.16 mA, intensity control off, high-power mode, no filter, air wedge, no offset, slice thickness 1 line (= 0.01319 mm), S.O.D. 38 mm, 1000 views, 3 samples per view, inter-slice spacing 1 line (= 0.01319 mm), field of reconstruction 12 mm (maximum field of view 12.59 mm), reconstruction offset 5000, reconstruction scale 2500. Acquired with 31 slices per rotation and 25 slices per set. Ring-removal processing done by Rachel Racicot based on correction of raw sinogram data using IDL routine “RK_SinoRingProcSimul” with default parameters. Deleted the first six duplicate slices of each rotation and last 15 slices entire dataset. Total final slices = 510.
Creator
Matthew Colbert
Date created
May 28, 2008
Date uploaded
June 10, 2024

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
583 MB
Image width
895
Image height
813
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.011720
Y pixel spacing
0.011720
Z pixel spacing
0.013190
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
510

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Institute of Geology and Paleontology, Mongolian Academy of Sciences
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
Data acquired for Justin Sipla. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object igm:100/1099 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000636297: Braincase [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000636297: Braincase [CTImageSeries] [CT] (this media)